Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NC_001879.2_cds_NP_054481.2_84008
CDS Infomation

[gene=atpA] [locus_tag=NitaCp005] [db_xref=UniProtKB/Swiss-Prot:P00823] [protein=ATP synthase CF1 alpha subunit] [protein_id=NP_054481.2] [location=complement(10630..12153)] [gbkey=CDS]
Sequence

ATGGTAACCATTCGAGCTGACGAAATTAGTAATATTATCCGTGAACGTATTGAACAATAT
AATAGAGAAGTAAAGATTGTAAATACCGGTACCGTACTTCAAGTAGGCGACGGCATTGCT
CGTATTCACGGTCTTGATGAAGTAATGGCGGGTGAATTAGTCGAATTTGAAGAGGGTACA
ATAGGCATTGCTCTGAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGCGATGGT
TTATTGATACAAGAAGGAAGTTCTGTAAAAGCAACGGGAAGAATTGCTCAGATACCCGTG
AGTGAGGCTTATTTGGGTCGTGTTATAAATGCCCTGGCTAAACCTATTGATGGTAGAGGT
GAAATTTCAGCTTCTGAATTTCGATTAATCGAATCTGCCGCCCCGGGTATTATTTCGCGC
CGTTCCGTATATGAGCCTCTTCAAACCGGGCTTATTGCTATTGATTCGATGATCCCTATA
GGACGTGGTCAGCGAGAATTAATTATTGGGGACAGACAGACCGGTAAAACAGCAGTAGCC
ACAGATACGATCCTCAATCAACAAGGTCAAAATGTAATATGTGTTTATGTAGCTATTGGG
CAAAAAGCATCTTCTGTGGCCCAGGTCGTAACTACTTTACAGGAAAGGGGAGCGATGGAA
TACACTATTGTGGTAGCCGAAACGGCAGATTCCCCTGCTACATTACAATACCTTGCTCCT
TATACAGGAGCAGCTCTGGCTGAATATTTTATGTATCGTGAACGACACACTTTAATCATT
TATGATGATCCCTCCAAACAAGCGCAAGCTTATCGCCAAATGTCTCTTCTATTACGAAGA
CCGCCCGGTCGTGAAGCTTATCCAGGAGATGTTTTTTATTTGCATTCACGCCTTTTGGAA
AGAGCCGCTAAATTAAGTTCTAGTTTAGGTGAAGGAAGTATGACCGCCTTACCAATAGTT
GAAACCCAATCGGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACTGAT
GGACAAATCTTCTTATCCGCCGACCTATTCAATTCTGGAATCAGACCTGCTATTAATGTG
GGTATCTCCGTTTCCAGAGTGGGGTCCGCAGCTCAAATAAAAGCCATGAAACAAGTAGCT
GGTAAATTAAAATTAGAACTAGCACAATTCGCAGAATTAGAAGCCTTTGCACAATTTGCT
TCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAATTG
CTTAAACAATCCCAATCAGCTCCTCTCACGGTAGAAGAGCAGATAATGACTATTTATACC
GGAACAAACGGCTATCTTGATTCATTAGAAGTTGGACAGGTAAGGAAATTTCTTGTTGAG
CTACGTACTTACTTAAAAACTAATAAACCTCAGTTCCAAGAAATCATATCTTCTACCAAG
ACATTTACCGAGGAAGCAGAAGCCCTTTTGAAAGAAGCTATTCAGGAACAAATGGACCGT
TTTATACTTCAGGAACAAGCATAA

Peptide Sequence

PEP ID

NP_054481.2
PEP Infomation

ATP synthase CF1 alpha subunit (plastid) [Nicotiana tabacum]
Sequence

MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
IGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG
EISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
TDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAP
YTGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
RAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINV
GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL
LKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTNKPQFQEIISSTK
TFTEEAEALLKEAIQEQMDRFILQEQA

Transcript Sequence

Gene sequence data has not been registered.